TAP SWI/SNF_SNF2 in Eragrostis tef

Full lineage¹: cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis

Protein source: Tef Improvement Project


The colour code corresponds to the rules for the domains:

should be contained
should not be contained

Domain rules

SNF2_N
AP2
PHD
zf-CCCH
HMG_box
Myb_DNA-binding

(Domain names are clickable)



List of proteins (65)

[Click here to show 1 isoforms]

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nameClick button to show/hide sequence: Download sequence?
augustus_masked-scaffold2360-abinit-gene-1.15-mRNA-1
maker-scaffold1-snap-gene-0.18-mRNA-1
maker-scaffold1025-snap-gene-0.20-mRNA-1
maker-scaffold10262-snap-gene-0.1-mRNA-1
maker-scaffold1042-augustus-gene-0.31-mRNA-1
maker-scaffold1064-snap-gene-2.38-mRNA-1
maker-scaffold1068-snap-gene-0.36-mRNA-1
maker-scaffold10896-snap-gene-0.44-mRNA-1
maker-scaffold1226-snap-gene-0.25-mRNA-1
maker-scaffold13-snap-gene-1.20-mRNA-1
maker-scaffold15770-snap-gene-0.4-mRNA-1
maker-scaffold1605-augustus-gene-0.28-mRNA-1
maker-scaffold1618-snap-gene-0.27-mRNA-1
maker-scaffold1677-snap-gene-0.21-mRNA-1
maker-scaffold181-augustus-gene-4.13-mRNA-1
maker-scaffold190-snap-gene-2.41-mRNA-1
maker-scaffold1993-augustus-gene-0.32-mRNA-1
maker-scaffold2109-augustus-gene-0.5-mRNA-1
maker-scaffold2360-snap-gene-2.53-mRNA-1
maker-scaffold2400-augustus-gene-0.32-mRNA-1
maker-scaffold2781-augustus-gene-0.14-mRNA-1
maker-scaffold3210-augustus-gene-0.33-mRNA-1
maker-scaffold3435-snap-gene-0.42-mRNA-1
maker-scaffold3522-snap-gene-1.68-mRNA-1
maker-scaffold364-snap-gene-2.56-mRNA-1
maker-scaffold3705-augustus-gene-1.41-mRNA-1
maker-scaffold3705-augustus-gene-1.42-mRNA-1
maker-scaffold3705-snap-gene-2.44-mRNA-1
maker-scaffold3727-snap-gene-1.29-mRNA-1
maker-scaffold3824-snap-gene-0.20-mRNA-1
maker-scaffold4350-snap-gene-0.23-mRNA-1
maker-scaffold4590-augustus-gene-1.13-mRNA-1
maker-scaffold461-augustus-gene-2.31-mRNA-1
maker-scaffold500-snap-gene-1.11-mRNA-1
maker-scaffold5539-snap-gene-0.40-mRNA-1
maker-scaffold5661-augustus-gene-0.6-mRNA-1
maker-scaffold5830-augustus-gene-1.17-mRNA-1
maker-scaffold5861-snap-gene-1.31-mRNA-1
maker-scaffold5898-snap-gene-0.38-mRNA-1
maker-scaffold591-snap-gene-1.38-mRNA-1
maker-scaffold5955-snap-gene-0.29-mRNA-1
maker-scaffold5977-augustus-gene-0.24-mRNA-1
maker-scaffold6042-snap-gene-1.54-mRNA-1
maker-scaffold6245-augustus-gene-0.23-mRNA-1
maker-scaffold6384-augustus-gene-0.27-mRNA-1
maker-scaffold6533-snap-gene-0.52-mRNA-1
maker-scaffold6815-snap-gene-0.33-mRNA-1
maker-scaffold6897-augustus-gene-0.43-mRNA-1
maker-scaffold6918-snap-gene-1.35-mRNA-1
maker-scaffold7034-snap-gene-2.14-mRNA-1
maker-scaffold7161-snap-gene-0.28-mRNA-1
maker-scaffold7174-augustus-gene-0.32-mRNA-1
maker-scaffold7268-augustus-gene-0.46-mRNA-1
maker-scaffold8236-augustus-gene-1.10-mRNA-1
maker-scaffold8367-snap-gene-1.19-mRNA-1
maker-scaffold972-snap-gene-0.38-mRNA-1
snap_masked-scaffold11002-abinit-gene-0.6-mRNA-1
snap_masked-scaffold1372-abinit-gene-0.17-mRNA-1
snap_masked-scaffold269-abinit-gene-1.18-mRNA-1
snap_masked-scaffold4316-abinit-gene-1.18-mRNA-1
snap_masked-scaffold458-abinit-gene-0.26-mRNA-1
snap_masked-scaffold5669-abinit-gene-0.12-mRNA-1
snap_masked-scaffold6704-abinit-gene-0.3-mRNA-1
snap_masked-scaffold7131-abinit-gene-1.5-mRNA-1
snap_masked-scaffold9912-abinit-gene-0.13-mRNA-1
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A list of species letter codes included in the protein names can be found here (opens in new tab).

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¹ Information recieved using NCBI E-utilities and NCBI taxonomy database.
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